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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863966.1_cds_XP_016515838.1_28141
CDS Infomation

[gene=LOC107832497] [db_xref=GeneID:107832497] [protein=phospholipase A1-IIgamma-like isoform X2] [protein_id=XP_016515838.1] [location=complement(join(45580..45655,45762..46291,46612..47181))] [gbkey=CDS]
Sequence

ATGGCTAACATGGCTGAGAATTGGGAGCAGCTTAGTGGAAAAAACAATTGGGAAGGATTA
CTAAGGCCCTTGGATCTTGATCTACGTAAATATATCATTCAATATGGAGAATTGGCTCAA
GCAACTTATGACACTTTCATCACAGAGAAAGCGTCTAAATATGCTGGAGCTAGCAGATAC
TCAATGGAAAGCCTTTTTACTAAGGTTGGACTTGACCCCCTGAAATATCGTGTAACCAAA
TTTTTCTATGCAACTGCATCCATTCCACTTCCTGATGCTTTCATTGTAAAATCATTGTCA
AGGGAAGCATGGAGTAAAGAATCAAATTTTATGGGGTATATTGCTGTGGCTACTGATGAG
GGTAAAGTTGCACTGGGAAGGAGAGATATTGTGGTTAATTGGAGAGGAACGATGCAGAAG
TTAGAGTGGGTGAATGATCTTCAATTTTTAGCTGTCCCAGGACCTAAAGTCTTTGGTGAC
GGAGGTTTGCTTTCTTTGCTTCAACCTTTGGTGCATCACGGGTTCTACAATATTTATACA
ACAGAAGATCCACGATCACAGTTTAATCAGGTAATTGAAGAAGTGAAAAGATTGGTTGAG
GAATATAAGAATGAAGAGGTTAGTATTACTGTAACTGGCCATAGCCTAGGTGCGTCACTT
GCAACCCTAAACGCGGTTGACATAGCTTTCAATGGTATCAACAAAACAAGCGAAGGCAAG
GAATTTCCAGTGACAGCTTTTGTATTCGCAAGTCCTAAAGTTGGGGATCTCAATTTTCAT
AAGGCATTTTCCAAGCTGAATAATCTTCATATCTTGAGAATTCATAATGTTTTGGATATT
GTCCCCAAATACCCACCCATTGGCTATATAGACGTCGGCGAGGAACTAATGATTGACACC
ACAAAATCCCCATATGTGAAGCCTCCTGGAGAAGTTGTCAGTTGGCATTTGTTGGAGCCA
TACTTGCACGGAGTTGCAGGCACTCAAGGAATAGGAATTTTAGCAGGTTTTAAACTAGAG
GTGAATCGTGATATCTCACTTGTCAATAAGCAGTGGGACATACTAAAAGATGAATATTGT
ATTCCTGGGCTTTGGTGGGCTGACAAGCACAAAGGGATGGTTCAACAACAGGATGGATCT
TGGCTTCTCTTGGATCGTGAGGAGTATGACTTCTGA

Peptide Sequence

PEP ID

XP_016515838.1
PEP Infomation

PREDICTED: phospholipase A1-IIgamma-like isoform X2 [Nicotiana tabacum]
Sequence

MANMAENWEQLSGKNNWEGLLRPLDLDLRKYIIQYGELAQATYDTFITEKASKYAGASRY
SMESLFTKVGLDPLKYRVTKFFYATASIPLPDAFIVKSLSREAWSKESNFMGYIAVATDE
GKVALGRRDIVVNWRGTMQKLEWVNDLQFLAVPGPKVFGDGGLLSLLQPLVHHGFYNIYT
TEDPRSQFNQVIEEVKRLVEEYKNEEVSITVTGHSLGASLATLNAVDIAFNGINKTSEGK
EFPVTAFVFASPKVGDLNFHKAFSKLNNLHILRIHNVLDIVPKYPPIGYIDVGEELMIDT
TKSPYVKPPGEVVSWHLLEPYLHGVAGTQGIGILAGFKLEVNRDISLVNKQWDILKDEYC
IPGLWWADKHKGMVQQQDGSWLLLDREEYDF

Transcript Sequence

Gene sequence data has not been registered.